Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
9930021J03RikH3BKP8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
9930021J03RikH3BKP8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
9930021J03RikH3BKP8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.52■□□□□ 0.55
9930021J03RikH3BKP8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
9930021J03RikH3BKP8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
9930021J03RikH3BKP8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Mir6236-201ENSMUST00000184437 123 ntBASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
9930021J03RikH3BKP8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
9930021J03RikH3BKP8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
9930021J03RikH3BKP8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
9930021J03RikH3BKP8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
9930021J03RikH3BKP8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
9930021J03RikH3BKP8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
9930021J03RikH3BKP8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms