Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc149F6V035 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc149F6V035 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc149F6V035 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc149F6V035 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc149F6V035 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.15■□□□□ 0.82
Ccdc149F6V035 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc149F6V035 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ccdc149F6V035 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc149F6V035 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc149F6V035 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccdc149F6V035 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc149F6V035 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Gm10849-201ENSMUST00000100397 618 ntBASIC20.13■□□□□ 0.81
Ccdc149F6V035 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc149F6V035 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc149F6V035 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.11■□□□□ 0.81
Ccdc149F6V035 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc149F6V035 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.1■□□□□ 0.81
Ccdc149F6V035 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc149F6V035 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.09■□□□□ 0.81
Ccdc149F6V035 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc149F6V035 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc149F6V035 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc149F6V035 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ccdc149F6V035 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ccdc149F6V035 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc149F6V035 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc149F6V035 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc149F6V035 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc149F6V035 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc149F6V035 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.08■□□□□ 0.81
Ccdc149F6V035 Gm27801-201ENSMUST00000184174 223 ntBASIC20.08■□□□□ 0.81
Ccdc149F6V035 Gm10033-202ENSMUST00000211874 928 ntBASIC20.08■□□□□ 0.81
Ccdc149F6V035 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccdc149F6V035 Gm9988-201ENSMUST00000069786 435 ntBASIC20.08■□□□□ 0.81
Ccdc149F6V035 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc149F6V035 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc149F6V035 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc149F6V035 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccdc149F6V035 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccdc149F6V035 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.07■□□□□ 0.8
Ccdc149F6V035 AV356131-201ENSMUST00000206201 750 ntBASIC20.07■□□□□ 0.8
Ccdc149F6V035 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms