Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc28a1E9PXX9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc28a1E9PXX9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc28a1E9PXX9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Slc28a1E9PXX9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc28a1E9PXX9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc28a1E9PXX9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc28a1E9PXX9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc28a1E9PXX9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Golph3-205ENSMUST00000228671 2842 ntBASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc28a1E9PXX9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc28a1E9PXX9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc28a1E9PXX9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc28a1E9PXX9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc28a1E9PXX9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc28a1E9PXX9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Slc28a1E9PXX9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Slc28a1E9PXX9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc28a1E9PXX9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc28a1E9PXX9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a1E9PXX9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a1E9PXX9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a1E9PXX9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.58■□□□□ 0.56
Slc28a1E9PXX9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc28a1E9PXX9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Slc28a1E9PXX9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms