Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Hist1h2acC0HKE2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist1h2acC0HKE2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Hist1h2acC0HKE2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.08■□□□□ 0.49
Hist1h2acC0HKE2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h2acC0HKE2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Hist1h2acC0HKE2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist1h2acC0HKE2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
Hist1h2acC0HKE2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist1h2acC0HKE2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Gm9959-201ENSMUST00000068277 390 ntBASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist1h2acC0HKE2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist1h2acC0HKE2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.04■□□□□ 0.48
Hist1h2acC0HKE2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms