Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc6a21A0A1B0GSD2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slc6a21A0A1B0GSD2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a21A0A1B0GSD2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a21A0A1B0GSD2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a21A0A1B0GSD2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc6a21A0A1B0GSD2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc6a21A0A1B0GSD2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a21A0A1B0GSD2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a21A0A1B0GSD2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc6a21A0A1B0GSD2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a21A0A1B0GSD2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a21A0A1B0GSD2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a21A0A1B0GSD2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc6a21A0A1B0GSD2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.66■■□□□ 1.06
Slc6a21A0A1B0GSD2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.66■■□□□ 1.06
Slc6a21A0A1B0GSD2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc6a21A0A1B0GSD2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc6a21A0A1B0GSD2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a21A0A1B0GSD2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a21A0A1B0GSD2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.64■■□□□ 1.05
Slc6a21A0A1B0GSD2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a21A0A1B0GSD2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a21A0A1B0GSD2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc6a21A0A1B0GSD2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc6a21A0A1B0GSD2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Gm12441-201ENSMUST00000121806 588 ntBASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Slc6a21A0A1B0GSD2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Slc6a21A0A1B0GSD2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a21A0A1B0GSD2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a21A0A1B0GSD2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a21A0A1B0GSD2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Slc6a21A0A1B0GSD2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.61■■□□□ 1.05
Slc6a21A0A1B0GSD2 Mir5133-201ENSMUST00000174955 77 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms