Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Mir6538-201ENSMUST00000183713 110 ntBASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Gm4430-201ENSMUST00000192413 1943 ntBASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igkv1-88A0A140T8N1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv1-88A0A140T8N1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Igkv1-88A0A140T8N1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv1-88A0A140T8N1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv1-88A0A140T8N1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv1-88A0A140T8N1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Igkv1-88A0A140T8N1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv1-88A0A140T8N1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms