Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav9d-4A0A0G2JG37 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.56□□□□□ -0.24
Trav9d-4A0A0G2JG37 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav9d-4A0A0G2JG37 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-4A0A0G2JG37 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-4A0A0G2JG37 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-4A0A0G2JG37 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-4A0A0G2JG37 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-4A0A0G2JG37 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-4A0A0G2JG37 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-4A0A0G2JG37 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms