Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Gm43530-201ENSMUST00000195920 274 ntBASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Notumos-201ENSMUST00000151998 2659 ntBASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.35□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Mir6236-201ENSMUST00000184437 123 ntBASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9n-2A0A0G2JDP3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9n-2A0A0G2JDP3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms