Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-1A0A0B4J1P8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-1A0A0B4J1P8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-1A0A0B4J1P8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv13-1A0A0B4J1P8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Gm45417-201ENSMUST00000209533 758 ntBASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Gm7143-201ENSMUST00000222811 859 ntBASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.66□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv13-1A0A0B4J1P8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv13-1A0A0B4J1P8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms