Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igkv16-104A0A0B4J1I1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.27■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Igkv16-104A0A0B4J1I1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.21■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv16-104A0A0B4J1I1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv16-104A0A0B4J1I1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Igkv16-104A0A0B4J1I1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.19■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.19■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.19■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv16-104A0A0B4J1I1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.16■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv16-104A0A0B4J1I1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms