Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv3A0A0A6YYE2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv3A0A0A6YYE2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv3A0A0A6YYE2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv3A0A0A6YYE2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trbv3A0A0A6YYE2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm11687-201ENSMUST00000118911 886 ntBASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv3A0A0A6YYE2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv3A0A0A6YYE2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv3A0A0A6YYE2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv3A0A0A6YYE2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv3A0A0A6YYE2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms