Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ighv3-3A0A0A6YWL2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm9870-201ENSMUST00000063874 645 ntBASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.5□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ighv3-3A0A0A6YWL2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms