Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm7143-201ENSMUST00000222811 859 ntBASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9d-1A0A075B699 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9d-1A0A075B699 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav9d-1A0A075B699 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9d-1A0A075B699 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9d-1A0A075B699 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9d-1A0A075B699 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9d-1A0A075B699 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9d-1A0A075B699 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trav9d-1A0A075B699 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9d-1A0A075B699 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9d-1A0A075B699 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9d-1A0A075B699 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9d-1A0A075B699 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9d-1A0A075B699 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9d-1A0A075B699 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav9d-1A0A075B699 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9d-1A0A075B699 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-1A0A075B699 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-1A0A075B699 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-1A0A075B699 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav9d-1A0A075B699 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9d-1A0A075B699 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms