Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-2A0A075B649 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Gm10420-201ENSMUST00000121713 882 ntBASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav13-2A0A075B649 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-2A0A075B649 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13-2A0A075B649 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav13-2A0A075B649 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav13-2A0A075B649 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Gm12366-201ENSMUST00000121722 873 ntBASIC13.25□□□□□ -0.29
Trav13-2A0A075B649 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms