Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav4-2A0A075B638 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav4-2A0A075B638 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav4-2A0A075B638 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav4-2A0A075B638 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav4-2A0A075B638 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Gm14523-201ENSMUST00000117260 558 ntBASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav4-2A0A075B638 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav4-2A0A075B638 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav4-2A0A075B638 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav4-2A0A075B638 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav4-2A0A075B638 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms