Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav16d-dv11A0A075B617 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16d-dv11A0A075B617 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16d-dv11A0A075B617 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav16d-dv11A0A075B617 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.52□□□□□ -0.08
Trav16d-dv11A0A075B617 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Gm6311-201ENSMUST00000073790 878 ntBASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav16d-dv11A0A075B617 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Trav16d-dv11A0A075B617 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav16d-dv11A0A075B617 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trav16d-dv11A0A075B617 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Gm9806-201ENSMUST00000051080 552 ntBASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav16d-dv11A0A075B617 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms