Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm25569-201ENSMUST00000157175 131 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm16574-201ENSMUST00000159301 745 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm5700-201ENSMUST00000191483 989 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm44420-201ENSMUST00000203669 490 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm5310-201ENSMUST00000197861 1511 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm6727-201ENSMUST00000204102 1518 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim9Q8C7M3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm8446-201ENSMUST00000188834 2712 ntBASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm22877-201ENSMUST00000175451 105 ntBASIC11.42□□□□□ -0.58
Trim9Q8C7M3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm28916-201ENSMUST00000186988 699 ntBASIC11.42□□□□□ -0.58
Trim9Q8C7M3 1700012J15Rik-201ENSMUST00000203458 471 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.42□□□□□ -0.58
Trim9Q8C7M3 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Gm44926-201ENSMUST00000207898 1826 ntBASIC11.42□□□□□ -0.58
Trim9Q8C7M3 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim9Q8C7M3 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 AC117245.3-201ENSMUST00000217495 2176 ntBASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim9Q8C7M3 Gm12645-201ENSMUST00000117297 275 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms