Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TprF6ZDS4 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
TprF6ZDS4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TprF6ZDS4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm15369-201ENSMUST00000119681 394 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm23563-201ENSMUST00000174900 251 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm17797-201ENSMUST00000182175 997 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm32496-201ENSMUST00000191988 702 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm37486-201ENSMUST00000195663 405 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm44716-201ENSMUST00000209007 710 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC9.66□□□□□ -0.86
TprF6ZDS4 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TprF6ZDS4 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Dcstamp-205ENSMUST00000228556 1684 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm22751-201ENSMUST00000102077 109 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Mir692-3-201ENSMUST00000102079 109 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Mir692-2-201ENSMUST00000102081 109 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm15516-201ENSMUST00000117292 193 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm16480-201ENSMUST00000120439 832 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm9458-201ENSMUST00000135273 727 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm29487-201ENSMUST00000190146 256 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm6028-201ENSMUST00000077111 574 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.66□□□□□ -0.86
TprF6ZDS4 Gm38220-201ENSMUST00000195774 1447 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.66□□□□□ -0.86
TprF6ZDS4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TprF6ZDS4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gm11235-201ENSMUST00000117763 333 ntBASIC9.65□□□□□ -0.86
TprF6ZDS4 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC9.65□□□□□ -0.86
TprF6ZDS4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
TprF6ZDS4 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gm20474-201ENSMUST00000180089 596 ntBASIC9.65□□□□□ -0.86
TprF6ZDS4 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gm43664-201ENSMUST00000196038 734 ntBASIC9.65□□□□□ -0.86
TprF6ZDS4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TprF6ZDS4 Gm32072-201ENSMUST00000200803 1434 ntBASIC9.65□□□□□ -0.86
TprF6ZDS4 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
TprF6ZDS4 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms