Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rad50P70388 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rad50P70388 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rad50P70388 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rad50P70388 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.57□□□□□ -0.4
Rad50P70388 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rad50P70388 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
Rad50P70388 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.56□□□□□ -0.4
Rad50P70388 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.56□□□□□ -0.4
Rad50P70388 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Gm13498-201ENSMUST00000119159 2166 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rad50P70388 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Gm7052-201ENSMUST00000167568 1512 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Gm11919-201ENSMUST00000117609 721 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.56□□□□□ -0.4
Rad50P70388 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.56□□□□□ -0.4
Rad50P70388 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Rad50P70388 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Rad50P70388 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC12.56□□□□□ -0.4
Rad50P70388 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Gm11942-201ENSMUST00000180255 345 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Gm8384-201ENSMUST00000190905 704 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.56□□□□□ -0.4
Rad50P70388 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rad50P70388 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rad50P70388 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rad50P70388 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rad50P70388 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Mir291b-201ENSMUST00000104838 79 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm12397-201ENSMUST00000117674 615 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm13204-201ENSMUST00000120110 821 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.55□□□□□ -0.4
Rad50P70388 Gm5526-201ENSMUST00000153604 423 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm25604-201ENSMUST00000158359 133 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm37141-201ENSMUST00000191938 422 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Gm37197-201ENSMUST00000195607 401 ntBASIC12.55□□□□□ -0.4
Rad50P70388 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rad50P70388 Gm44888-201ENSMUST00000209119 2541 ntBASIC12.55□□□□□ -0.4
Rad50P70388 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rad50P70388 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Rad50P70388 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rad50P70388 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Rad50P70388 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.54□□□□□ -0.4
Rad50P70388 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rad50P70388 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rad50P70388 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rad50P70388 Gm23595-201ENSMUST00000104306 130 ntBASIC12.54□□□□□ -0.4
Rad50P70388 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms