Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm8557-201ENSMUST00000220777 475 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Igh-VJ558P01758 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9□□□□□ -0.97
Igh-VJ558P01758 BC017643-202ENSMUST00000106115 2239 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9□□□□□ -0.97
Igh-VJ558P01758 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9□□□□□ -0.97
Igh-VJ558P01758 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm9220-201ENSMUST00000190721 2544 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 AC117245.3-201ENSMUST00000217495 2176 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Rian-213ENSMUST00000182981 1219 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm9515-201ENSMUST00000200276 647 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm5311-201ENSMUST00000203518 709 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm45219-201ENSMUST00000205602 465 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm18499-201ENSMUST00000220808 1021 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 AC130477.1-201ENSMUST00000226982 420 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 AC156016.4-201ENSMUST00000227470 647 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 AC141884.2-201ENSMUST00000228811 775 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm38111-201ENSMUST00000194817 2741 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Gm4865-201ENSMUST00000196284 1309 ntBASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Igh-VJ558P01758 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Igh-VJ558P01758 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms