Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Map4k4-218ENSMUST00000195860 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC8.54□□□□□ -1.04
Trim63Q38HM4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.54□□□□□ -1.04
Trim63Q38HM4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Eapp-204ENSMUST00000161592 4186 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trim63Q38HM4 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Rnf43-201ENSMUST00000040089 3670 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm37516-201ENSMUST00000192593 1954 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Bank1-205ENSMUST00000198206 2538 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Zfp446-203ENSMUST00000108536 3705 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Mamdc4-201ENSMUST00000095117 3990 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm43972-201ENSMUST00000181398 1467 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm43544-201ENSMUST00000196474 2472 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Mir7023-201ENSMUST00000185093 64 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm6722-201ENSMUST00000221586 390 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 AC238811.3-201ENSMUST00000225422 709 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 AC125117.2-201ENSMUST00000228344 1140 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Tmem174-201ENSMUST00000050389 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Ncald-201ENSMUST00000090150 3733 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Uqcc1-204ENSMUST00000109636 2633 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm4924-201ENSMUST00000165906 2645 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm21142-201ENSMUST00000179999 2604 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm2897-201ENSMUST00000166494 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm12408-206ENSMUST00000211577 1983 ntTSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Nr5a2-203ENSMUST00000192357 1859 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm44937-201ENSMUST00000207705 2691 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Ednrb-202ENSMUST00000172237 3989 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Gm28424-201ENSMUST00000187393 1319 ntBASIC8.53□□□□□ -1.04
Trim63Q38HM4 Dtnbos-201ENSMUST00000173847 1662 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trim63Q38HM4 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim63Q38HM4 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC8.52□□□□□ -1.04
Trim63Q38HM4 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Trim63Q38HM4 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim63Q38HM4 BC026762-201ENSMUST00000206555 2503 ntBASIC8.52□□□□□ -1.04
Trim63Q38HM4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim63Q38HM4 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trim63Q38HM4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Rtel1-204ENSMUST00000108814 4322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Tmem248-201ENSMUST00000065329 3607 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm44541-201ENSMUST00000207837 2907 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Metap2-210ENSMUST00000181217 1984 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Odf2-210ENSMUST00000113765 3188 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Msh4-203ENSMUST00000188338 2802 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trim63Q38HM4 Gm24048-201ENSMUST00000102411 106 ntBASIC8.52□□□□□ -1.05
Trim63Q38HM4 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms