Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim9Q8C7M3 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm22344-201ENSMUST00000122642 278 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Mir6360-201ENSMUST00000184278 126 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm7539-201ENSMUST00000189789 630 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm8557-201ENSMUST00000220777 475 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm6353-201ENSMUST00000223234 1051 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim9Q8C7M3 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm11235-201ENSMUST00000117763 333 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm14213-201ENSMUST00000119778 768 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm5526-201ENSMUST00000153604 423 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Mir7032-201ENSMUST00000185154 79 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm37232-201ENSMUST00000194887 367 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm5298-201ENSMUST00000201122 892 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm19121-201ENSMUST00000215720 1022 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 AC154683.1-201ENSMUST00000228409 1284 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 AC141884.2-201ENSMUST00000228811 775 ntBASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim9Q8C7M3 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms