Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh19Q80TF3 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh19Q80TF3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh19Q80TF3 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pcdh19Q80TF3 Ppip5k1-204ENSMUST00000110627 5494 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Acsl1-201ENSMUST00000034046 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm23769-201ENSMUST00000104441 121 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm22495-201ENSMUST00000104492 126 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm5133-201ENSMUST00000118940 1255 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm25318-201ENSMUST00000122554 314 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm20493-201ENSMUST00000173706 213 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm7765-201ENSMUST00000182585 974 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm37002-201ENSMUST00000194560 373 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm42859-201ENSMUST00000199572 193 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm18010-201ENSMUST00000203553 202 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm44251-201ENSMUST00000204963 442 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pcdh19Q80TF3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Pcdh19Q80TF3 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pcdh19Q80TF3 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.4□□□□□ -0.75
Pcdh19Q80TF3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Pcdh19Q80TF3 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pcdh19Q80TF3 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pcdh19Q80TF3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Mir1249-201ENSMUST00000116791 98 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm5801-201ENSMUST00000182247 780 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm5254-201ENSMUST00000188353 977 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm3527-201ENSMUST00000198905 460 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm43066-201ENSMUST00000199589 1260 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm45072-201ENSMUST00000208673 929 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gm45308-201ENSMUST00000210610 415 ntBASIC10.39□□□□□ -0.75
Pcdh19Q80TF3 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms