Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
P04940 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Gm10829-201ENSMUST00000202084 2988 ntBASIC8.48□□□□□ -1.05
P04940 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Gm44975-201ENSMUST00000207435 1390 ntBASIC8.48□□□□□ -1.05
P04940 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
P04940 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
P04940 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC8.47□□□□□ -1.05
P04940 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
P04940 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Gm44888-201ENSMUST00000209119 2541 ntBASIC8.47□□□□□ -1.05
P04940 Gm45501-201ENSMUST00000211468 2526 ntBASIC8.47□□□□□ -1.05
P04940 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
P04940 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC8.47□□□□□ -1.05
P04940 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Gm1826-201ENSMUST00000118646 1162 ntBASIC8.47□□□□□ -1.05
P04940 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC8.47□□□□□ -1.05
P04940 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC8.47□□□□□ -1.05
P04940 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC8.47□□□□□ -1.05
P04940 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.47□□□□□ -1.05
P04940 Gm27438-201ENSMUST00000183480 110 ntBASIC8.47□□□□□ -1.05
P04940 Mir6366-201ENSMUST00000184472 82 ntBASIC8.47□□□□□ -1.05
P04940 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC8.47□□□□□ -1.05
P04940 Gm37232-201ENSMUST00000194887 367 ntBASIC8.47□□□□□ -1.05
P04940 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC8.47□□□□□ -1.05
P04940 Gm42430-201ENSMUST00000197209 616 ntBASIC8.47□□□□□ -1.05
P04940 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC8.47□□□□□ -1.05
P04940 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.47□□□□□ -1.05
P04940 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.47□□□□□ -1.05
P04940 Gm8557-201ENSMUST00000220777 475 ntBASIC8.47□□□□□ -1.05
P04940 AC134860.2-201ENSMUST00000225277 1036 ntBASIC8.47□□□□□ -1.05
P04940 AC141884.2-201ENSMUST00000228811 775 ntBASIC8.47□□□□□ -1.05
P04940 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
P04940 Rps3a2-201ENSMUST00000074245 792 ntBASIC8.47□□□□□ -1.05
P04940 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
P04940 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
P04940 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
P04940 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Gm37484-201ENSMUST00000195378 2523 ntBASIC8.47□□□□□ -1.05
P04940 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC8.47□□□□□ -1.05
P04940 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 CT009713.5-203ENSMUST00000224218 2079 ntBASIC8.47□□□□□ -1.05
P04940 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
P04940 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
P04940 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC8.47□□□□□ -1.05
P04940 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
P04940 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC8.46□□□□□ -1.05
P04940 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC8.46□□□□□ -1.05
P04940 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
P04940 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
P04940 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC8.46□□□□□ -1.05
P04940 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
P04940 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
P04940 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
P04940 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms