Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 AC154186.1-201ENSMUST00000227711 1597 ntBASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx6-1Q99MA9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm12439-201ENSMUST00000117162 365 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm11929-201ENSMUST00000118175 945 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm14650-201ENSMUST00000120400 889 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm17107-201ENSMUST00000170983 553 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm28032-201ENSMUST00000184104 96 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm19798-201ENSMUST00000201502 457 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm44388-201ENSMUST00000204350 258 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm45308-201ENSMUST00000210610 415 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 AC127583.1-201ENSMUST00000224351 540 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 AC166061.1-201ENSMUST00000225163 1138 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 AC174647.1-201ENSMUST00000227419 1271 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx6-1Q99MA9 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm24161-201ENSMUST00000104592 130 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm8864-201ENSMUST00000118653 1010 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm16210-201ENSMUST00000122161 610 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm25154-201ENSMUST00000157123 119 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm5766-202ENSMUST00000161633 799 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm20474-201ENSMUST00000180089 596 ntBASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Nkx6-1Q99MA9 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms