Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm4864-201ENSMUST00000219894 1461 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Mef2c-218ENSMUST00000198199 2589 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm20236-201ENSMUST00000193037 4540 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Gm37094-201ENSMUST00000193352 4540 ntBASIC8.57□□□□□ -1.04
Trim63Q38HM4 Osbpl3-203ENSMUST00000114466 2916 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trim63Q38HM4 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm18637-201ENSMUST00000217665 1900 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm34424-202ENSMUST00000214104 1652 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gnpda2-206ENSMUST00000166298 1755 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Aftph-209ENSMUST00000177543 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm16206-201ENSMUST00000132485 1966 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm15617-201ENSMUST00000118973 771 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm13612-201ENSMUST00000119276 390 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm9431-201ENSMUST00000119765 1051 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm13899-201ENSMUST00000121519 1255 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm16215-201ENSMUST00000161990 637 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm20392-201ENSMUST00000173047 701 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Mir6392-201ENSMUST00000184924 108 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm43446-201ENSMUST00000197669 1096 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm6450-201ENSMUST00000200896 574 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Scn3b-202ENSMUST00000114956 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Olfr6-202ENSMUST00000213552 4349 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Clec7a-201ENSMUST00000112076 2277 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Rprd1b-201ENSMUST00000029180 4283 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gm5281-201ENSMUST00000197542 2134 ntBASIC8.56□□□□□ -1.04
Trim63Q38HM4 Olfr92-203ENSMUST00000216341 2115 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim63Q38HM4 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.55□□□□□ -1.04
Trim63Q38HM4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim63Q38HM4 9630001P10Rik-202ENSMUST00000181335 3006 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim63Q38HM4 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms