Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm22937-201ENSMUST00000103954 131 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm12947-201ENSMUST00000116114 420 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm23081-201ENSMUST00000157845 297 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm16547-201ENSMUST00000159474 293 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm37723-201ENSMUST00000194480 565 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm43969-201ENSMUST00000204833 535 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm45219-201ENSMUST00000205602 465 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 AC155300.1-201ENSMUST00000219134 480 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trub1Q8C0D0 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm43737-201ENSMUST00000199915 2740 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm14219-201ENSMUST00000120414 288 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm29543-201ENSMUST00000188138 967 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm44640-201ENSMUST00000206894 247 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trub1Q8C0D0 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.81□□□□□ -0.68
Trub1Q8C0D0 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Atxn1-203ENSMUST00000180110 3901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.8□□□□□ -0.68
Trub1Q8C0D0 Gm34379-201ENSMUST00000195036 290 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms