Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.34□□□□□ -0.91
P20040 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.34□□□□□ -0.91
P20040 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm25053-201ENSMUST00000103982 133 ntBASIC9.34□□□□□ -0.91
P20040 Gm25922-201ENSMUST00000104281 130 ntBASIC9.34□□□□□ -0.91
P20040 Gm14592-201ENSMUST00000117201 560 ntBASIC9.34□□□□□ -0.91
P20040 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.34□□□□□ -0.91
P20040 Gm12663-201ENSMUST00000118481 958 ntBASIC9.34□□□□□ -0.91
P20040 Mir1905-201ENSMUST00000122779 82 ntBASIC9.34□□□□□ -0.91
P20040 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.34□□□□□ -0.91
P20040 Gm24679-201ENSMUST00000158762 111 ntBASIC9.34□□□□□ -0.91
P20040 Gm16030-201ENSMUST00000159098 603 ntBASIC9.34□□□□□ -0.91
P20040 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.34□□□□□ -0.91
P20040 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.34□□□□□ -0.91
P20040 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P20040 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC9.34□□□□□ -0.91
P20040 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.34□□□□□ -0.91
P20040 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
P20040 Gm18776-201ENSMUST00000188833 654 ntBASIC9.34□□□□□ -0.91
P20040 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm25053-202ENSMUST00000199731 132 ntBASIC9.34□□□□□ -0.91
P20040 Gm45120-201ENSMUST00000208880 408 ntBASIC9.34□□□□□ -0.91
P20040 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.34□□□□□ -0.91
P20040 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm9102-201ENSMUST00000219250 465 ntBASIC9.34□□□□□ -0.91
P20040 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
P20040 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.34□□□□□ -0.91
P20040 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
P20040 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.34□□□□□ -0.91
P20040 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
P20040 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
P20040 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.34□□□□□ -0.92
P20040 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.92
P20040 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
P20040 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.33□□□□□ -0.92
P20040 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
P20040 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.33□□□□□ -0.92
P20040 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC9.33□□□□□ -0.92
P20040 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.33□□□□□ -0.92
P20040 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.33□□□□□ -0.92
P20040 Gm11952-201ENSMUST00000121172 821 ntBASIC9.33□□□□□ -0.92
P20040 Gm16397-201ENSMUST00000122201 494 ntBASIC9.33□□□□□ -0.92
P20040 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.33□□□□□ -0.92
P20040 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
P20040 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.33□□□□□ -0.92
P20040 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
P20040 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.33□□□□□ -0.92
P20040 Gm18514-201ENSMUST00000218980 436 ntBASIC9.33□□□□□ -0.92
P20040 Gm18968-201ENSMUST00000221319 862 ntBASIC9.33□□□□□ -0.92
P20040 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.33□□□□□ -0.92
P20040 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Gm16380-201ENSMUST00000077997 478 ntBASIC9.33□□□□□ -0.92
P20040 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
P20040 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
P20040 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.33□□□□□ -0.92
P20040 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms