Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim43aQ3TL54 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm17877-201ENSMUST00000192578 814 ntBASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm42710-201ENSMUST00000200608 985 ntBASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm7600-201ENSMUST00000209657 785 ntBASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trim43aQ3TL54 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trim43aQ3TL54 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Mir1901-201ENSMUST00000122616 78 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm6425-201ENSMUST00000136332 790 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm7583-201ENSMUST00000182941 1005 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Gm5189-201ENSMUST00000221796 261 ntBASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trim43aQ3TL54 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms