Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col8a2P25318 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC8.79□□□□□ -1
Col8a2P25318 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC8.79□□□□□ -1
Col8a2P25318 Gm10580-201ENSMUST00000097985 396 ntBASIC8.79□□□□□ -1
Col8a2P25318 Gm10582-201ENSMUST00000097987 396 ntBASIC8.79□□□□□ -1
Col8a2P25318 Gm10583-201ENSMUST00000097988 396 ntBASIC8.79□□□□□ -1
Col8a2P25318 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC8.79□□□□□ -1
Col8a2P25318 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC8.79□□□□□ -1
Col8a2P25318 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC8.79□□□□□ -1
Col8a2P25318 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Col8a2P25318 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col8a2P25318 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Col8a2P25318 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC8.78□□□□□ -1
Col8a2P25318 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm26660-202ENSMUST00000223620 4112 ntBASIC8.78□□□□□ -1
Col8a2P25318 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.78□□□□□ -1
Col8a2P25318 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Col8a2P25318 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Mir291b-201ENSMUST00000104838 79 ntBASIC8.78□□□□□ -1
Col8a2P25318 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm8216-201ENSMUST00000117232 601 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm13204-201ENSMUST00000120110 821 ntBASIC8.78□□□□□ -1
Col8a2P25318 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC8.78□□□□□ -1
Col8a2P25318 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm7572-201ENSMUST00000182616 766 ntBASIC8.78□□□□□ -1
Col8a2P25318 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC8.78□□□□□ -1
Col8a2P25318 Gm7985-201ENSMUST00000183329 981 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm27316-201ENSMUST00000184884 277 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm8022-201ENSMUST00000191763 904 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm37301-201ENSMUST00000195412 568 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm18555-201ENSMUST00000197935 584 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm42803-201ENSMUST00000201051 451 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm45308-201ENSMUST00000210610 415 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm8796-201ENSMUST00000219122 936 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC8.78□□□□□ -1
Col8a2P25318 Gm8557-201ENSMUST00000220777 475 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm5189-201ENSMUST00000221796 261 ntBASIC8.78□□□□□ -1
Col8a2P25318 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC8.78□□□□□ -1
Col8a2P25318 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC8.78□□□□□ -1
Col8a2P25318 Mir194-2-201ENSMUST00000083648 86 ntBASIC8.78□□□□□ -1
Col8a2P25318 Atf7-201ENSMUST00000096143 390 ntBASIC8.78□□□□□ -1
Col8a2P25318 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm43372-201ENSMUST00000202662 3016 ntBASIC8.78□□□□□ -1
Col8a2P25318 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm37583-201ENSMUST00000195460 2487 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm6783-201ENSMUST00000120916 1437 ntBASIC8.78□□□□□ -1
Col8a2P25318 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.78□□□□□ -1
Col8a2P25318 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm5472-201ENSMUST00000178604 1678 ntBASIC8.78□□□□□ -1
Col8a2P25318 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC8.78□□□□□ -1
Col8a2P25318 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Col8a2P25318 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Col8a2P25318 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Col8a2P25318 Gm17244-201ENSMUST00000192482 3416 ntBASIC8.77□□□□□ -1
Col8a2P25318 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Col8a2P25318 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.77□□□□□ -1
Col8a2P25318 Gm11470-201ENSMUST00000118868 1475 ntBASIC8.77□□□□□ -1
Col8a2P25318 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Col8a2P25318 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Col8a2P25318 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
Col8a2P25318 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Col8a2P25318 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC8.77□□□□□ -1.01
Col8a2P25318 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Col8a2P25318 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms