Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm15423-201ENSMUST00000150600 1430 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm22777-201ENSMUST00000104091 129 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 1700019E08Rik-201ENSMUST00000134308 424 ntTSL 5 BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Cdrt4os1-202ENSMUST00000153180 1109 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Mir6909-201ENSMUST00000184212 62 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm18471-201ENSMUST00000208272 452 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm18670-201ENSMUST00000218712 696 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm18504-201ENSMUST00000220917 929 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm6684-201ENSMUST00000053717 685 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Elobl-202ENSMUST00000082339 300 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm43737-201ENSMUST00000199915 2740 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Prpf39-201ENSMUST00000120580 4069 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Col4a6B1AVK5 Lypd4-201ENSMUST00000079306 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm14021-201ENSMUST00000117683 961 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm31941-201ENSMUST00000209689 350 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Apom-201ENSMUST00000025249 1013 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Als2cr12-201ENSMUST00000055313 1540 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Mrgpra2b-201ENSMUST00000119798 1265 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm14138-201ENSMUST00000122061 745 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm8425-201ENSMUST00000171395 769 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm18857-201ENSMUST00000210421 901 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Gm29783-201ENSMUST00000219398 369 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 AC093022.2-202ENSMUST00000227500 866 ntBASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Krtap9-1-201ENSMUST00000093936 1044 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.66□□□□□ -0.7
Col4a6B1AVK5 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms