Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx6-1Q99MA9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm38247-201ENSMUST00000194675 433 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm6312-201ENSMUST00000204060 1194 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm18862-201ENSMUST00000204643 933 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm5292-201ENSMUST00000073317 580 ntBASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx6-1Q99MA9 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Nkx6-1Q99MA9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 A1cf-204ENSMUST00000224564 1432 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm24066-201ENSMUST00000104515 131 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Lyrm1-204ENSMUST00000106518 875 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm7781-201ENSMUST00000117258 788 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm13215-201ENSMUST00000117559 472 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm12397-201ENSMUST00000117674 615 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm15132-201ENSMUST00000118581 652 ntBASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Nkx6-1Q99MA9 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms