Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm11540-201ENSMUST00000117457 780 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm12028-201ENSMUST00000118065 436 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm12684-201ENSMUST00000118675 999 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm14176-201ENSMUST00000121302 477 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm14829-201ENSMUST00000121499 1138 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm14006-201ENSMUST00000122132 981 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm8643-201ENSMUST00000195228 625 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 BB187690-201ENSMUST00000198619 1176 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 AC124613.1-201ENSMUST00000198711 88 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm43106-201ENSMUST00000199485 637 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm6352-201ENSMUST00000203583 1134 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm44420-201ENSMUST00000203669 490 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm45745-201ENSMUST00000211447 1180 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm5040-201ENSMUST00000218609 800 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 CT030035.1-201ENSMUST00000223964 935 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 AC118639.1-202ENSMUST00000226957 653 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.32□□□□□ -0.92
Scrt1Q99M85 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Scrt1Q99M85 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Scrt1Q99M85 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Scrt1Q99M85 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms