Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gli3Q61602 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gli3Q61602 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Gli3Q61602 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 Gm12297-201ENSMUST00000121380 979 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Snhg17-208ENSMUST00000154242 346 ntTSL 3 BASIC13.88□□□□□ -0.19
Gli3Q61602 Mir1964-201ENSMUST00000158514 83 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Gm8254-201ENSMUST00000182326 972 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 Gm5881-201ENSMUST00000204737 367 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 Gm30196-201ENSMUST00000208957 160 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 Tmem147-207ENSMUST00000209065 727 ntTSL 2 BASIC13.88□□□□□ -0.19
Gli3Q61602 Gm7319-201ENSMUST00000210047 778 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 AC102523.2-201ENSMUST00000227813 983 ntBASIC13.88□□□□□ -0.19
Gli3Q61602 9330161L09Rik-201ENSMUST00000056140 999 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Gli3Q61602 Retnlg-201ENSMUST00000065666 608 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gli3Q61602 Phactr1-202ENSMUST00000110161 1950 ntTSL 5 BASIC13.88□□□□□ -0.19
Gli3Q61602 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Gli3Q61602 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Gli3Q61602 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm29427-201ENSMUST00000188520 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm12097-201ENSMUST00000121523 1414 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Gli3Q61602 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm25232-201ENSMUST00000104502 132 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm12700-201ENSMUST00000118145 457 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Gm9164-201ENSMUST00000118700 1014 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC13.87□□□□□ -0.19
Gli3Q61602 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm38306-201ENSMUST00000193954 237 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC13.87□□□□□ -0.19
Gli3Q61602 Gm36431-202ENSMUST00000209956 687 ntTSL 5 BASIC13.87□□□□□ -0.19
Gli3Q61602 Pdzk1ip1-201ENSMUST00000030488 1119 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Copg1-201ENSMUST00000049966 921 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 AC135083.1-201ENSMUST00000227773 1331 ntBASIC13.87□□□□□ -0.19
Gli3Q61602 Gm35722-201ENSMUST00000218270 1625 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gli3Q61602 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.86□□□□□ -0.19
Gli3Q61602 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gli3Q61602 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm10531-201ENSMUST00000193527 2303 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC13.86□□□□□ -0.19
Gli3Q61602 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gli3Q61602 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm11279-201ENSMUST00000121524 1256 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 Gstm1-202ENSMUST00000126593 828 ntTSL 3 BASIC13.86□□□□□ -0.19
Gli3Q61602 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 4930479D17Rik-201ENSMUST00000146754 740 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm25736-201ENSMUST00000175165 101 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 n-R5s210-201ENSMUST00000177688 119 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 Mir6972-201ENSMUST00000184774 64 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm36569-201ENSMUST00000195082 965 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm37955-201ENSMUST00000195098 212 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Gm23405-201ENSMUST00000082542 160 ntBASIC13.86□□□□□ -0.19
Gli3Q61602 2810455O05Rik-201ENSMUST00000138442 1691 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC13.86□□□□□ -0.19
Gli3Q61602 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gli3Q61602 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Ccr6-206ENSMUST00000180103 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Gli3Q61602 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gli3Q61602 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gli3Q61602 Gm5310-201ENSMUST00000197861 1511 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms