Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm24346-201ENSMUST00000158712 194 ntBASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm22876-201ENSMUST00000175450 298 ntBASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm37301-201ENSMUST00000195412 568 ntBASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp2aQ9DB34 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm22937-201ENSMUST00000103954 131 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm12337-201ENSMUST00000119634 400 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm15136-201ENSMUST00000120552 533 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm14993-201ENSMUST00000121180 164 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm12950-201ENSMUST00000121683 417 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm43506-201ENSMUST00000200675 753 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm25514-201ENSMUST00000083860 135 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp2aQ9DB34 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms