Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC9.34□□□□□ -0.91
Scrt1Q99M85 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm7833-201ENSMUST00000183288 990 ntBASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm29543-201ENSMUST00000188138 967 ntBASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm29689-201ENSMUST00000221076 589 ntBASIC9.34□□□□□ -0.91
Scrt1Q99M85 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Gm6304-201ENSMUST00000096579 447 ntBASIC9.34□□□□□ -0.91
Scrt1Q99M85 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.34□□□□□ -0.91
Scrt1Q99M85 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Scrt1Q99M85 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.34□□□□□ -0.91
Scrt1Q99M85 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Scrt1Q99M85 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Scrt1Q99M85 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Nln-205ENSMUST00000224945 2486 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm8968-201ENSMUST00000199133 1303 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Snord17-201ENSMUST00000104526 238 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm12470-201ENSMUST00000117239 1049 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm11919-201ENSMUST00000117609 721 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm27316-201ENSMUST00000184884 277 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm9353-201ENSMUST00000200472 604 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm18256-201ENSMUST00000209087 907 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm9644-201ENSMUST00000212828 1183 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Gm3926-201ENSMUST00000223378 1123 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 AC101205.2-201ENSMUST00000226206 715 ntBASIC9.33□□□□□ -0.92
Scrt1Q99M85 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.33□□□□□ -0.92
Scrt1Q99M85 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms