Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm13045-201ENSMUST00000119019 712 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm13019-201ENSMUST00000120000 276 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm9369-201ENSMUST00000196009 733 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Snord23-201ENSMUST00000116828 109 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm14942-201ENSMUST00000119642 336 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm6425-201ENSMUST00000136332 790 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm20392-201ENSMUST00000173047 701 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm43438-201ENSMUST00000198133 379 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm7344-201ENSMUST00000212122 1222 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Mbd1-201ENSMUST00000097530 2833 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 AC165080.1-201ENSMUST00000215257 3123 ntBASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lysmd4Q8CC84 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm44741-201ENSMUST00000207503 2127 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Lysmd4Q8CC84 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms