Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox1P53783 Gm25561-201ENSMUST00000104607 125 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 Gm14332-201ENSMUST00000121982 899 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm38004-201ENSMUST00000192972 357 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Gm43674-201ENSMUST00000196313 791 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 Gm6342-201ENSMUST00000204344 766 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.89□□□□□ -0.67
Sox1P53783 Gm45795-201ENSMUST00000211847 400 ntBASIC10.89□□□□□ -0.67
Sox1P53783 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm18623-201ENSMUST00000219860 953 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 n-R5s25-201ENSMUST00000082923 119 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.89□□□□□ -0.67
Sox1P53783 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Gm38111-201ENSMUST00000194817 2741 ntBASIC10.89□□□□□ -0.67
Sox1P53783 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox1P53783 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox1P53783 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox1P53783 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC10.88□□□□□ -0.67
Sox1P53783 Gm5270-201ENSMUST00000121506 1002 ntBASIC10.88□□□□□ -0.67
Sox1P53783 Gm5697-201ENSMUST00000122295 2482 ntBASIC10.88□□□□□ -0.67
Sox1P53783 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox1P53783 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox1P53783 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox1P53783 Mir7115-201ENSMUST00000184275 64 ntBASIC10.88□□□□□ -0.67
Sox1P53783 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.88□□□□□ -0.67
Sox1P53783 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox1P53783 Gm18122-201ENSMUST00000211390 904 ntBASIC10.88□□□□□ -0.67
Sox1P53783 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC10.88□□□□□ -0.67
Sox1P53783 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox1P53783 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox1P53783 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox1P53783 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms