Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm24140-201ENSMUST00000122773 326 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm8643-201ENSMUST00000195228 625 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm44420-201ENSMUST00000203669 490 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm18466-201ENSMUST00000209147 499 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC10.05□□□□□ -0.8
Nkx2-6P43688 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Nkx2-6P43688 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Nkx2-6P43688 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm12397-201ENSMUST00000117674 615 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm15707-201ENSMUST00000118804 996 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm4943-201ENSMUST00000132879 424 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm24943-201ENSMUST00000158329 433 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm6686-201ENSMUST00000178455 258 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.04□□□□□ -0.8
Nkx2-6P43688 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Nkx2-6P43688 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Nkx2-6P43688 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms