Protein–RNA interactions for Protein: Q9QUK0

Cdkl2, Cyclin-dependent kinase-like 2, mousemouse

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl2Q9QUK0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.46■□□□□ 0.71
Cdkl2Q9QUK0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl2Q9QUK0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cdkl2Q9QUK0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl2Q9QUK0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl2Q9QUK0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl2Q9QUK0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl2Q9QUK0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cdkl2Q9QUK0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cdkl2Q9QUK0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cdkl2Q9QUK0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cdkl2Q9QUK0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl2Q9QUK0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.42■□□□□ 0.7
Cdkl2Q9QUK0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cdkl2Q9QUK0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl2Q9QUK0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl2Q9QUK0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cdkl2Q9QUK0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.41■□□□□ 0.7
Cdkl2Q9QUK0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl2Q9QUK0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl2Q9QUK0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl2Q9QUK0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl2Q9QUK0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl2Q9QUK0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cdkl2Q9QUK0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cdkl2Q9QUK0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.39■□□□□ 0.7
Cdkl2Q9QUK0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cdkl2Q9QUK0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cdkl2Q9QUK0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cdkl2Q9QUK0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdkl2Q9QUK0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkl2Q9QUK0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkl2Q9QUK0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkl2Q9QUK0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkl2Q9QUK0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms