Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn5aQ9JJV9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn5aQ9JJV9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn5aQ9JJV9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Scn5aQ9JJV9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Scn5aQ9JJV9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn5aQ9JJV9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Scn5aQ9JJV9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.85■□□□□ 0.93
Scn5aQ9JJV9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Scn5aQ9JJV9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scn5aQ9JJV9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scn5aQ9JJV9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.84■□□□□ 0.93
Scn5aQ9JJV9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn5aQ9JJV9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Scn5aQ9JJV9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn5aQ9JJV9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn5aQ9JJV9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scn5aQ9JJV9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 Gm10602-201ENSMUST00000098239 609 ntBASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scn5aQ9JJV9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn5aQ9JJV9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn5aQ9JJV9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn5aQ9JJV9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.83■□□□□ 0.92
Scn5aQ9JJV9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Scn5aQ9JJV9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scn5aQ9JJV9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scn5aQ9JJV9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn5aQ9JJV9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn5aQ9JJV9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Gm13148-201ENSMUST00000118892 745 ntBASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Gm7514-201ENSMUST00000209475 934 ntBASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scn5aQ9JJV9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 Gm12441-201ENSMUST00000121806 588 ntBASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 Nespas-201ENSMUST00000143738 1083 ntBASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.77■□□□□ 0.92
Scn5aQ9JJV9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Scn5aQ9JJV9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn5aQ9JJV9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn5aQ9JJV9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms