Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1dQ9JI58 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1dQ9JI58 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1dQ9JI58 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Raet1dQ9JI58 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Raet1dQ9JI58 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Raet1dQ9JI58 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1dQ9JI58 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1dQ9JI58 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.44■□□□□ 0.54
Raet1dQ9JI58 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.44■□□□□ 0.54
Raet1dQ9JI58 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.44■□□□□ 0.54
Raet1dQ9JI58 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1dQ9JI58 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.44■□□□□ 0.54
Raet1dQ9JI58 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1dQ9JI58 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1dQ9JI58 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Raet1dQ9JI58 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1dQ9JI58 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Gm13241-201ENSMUST00000094493 780 ntBASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1dQ9JI58 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Raet1dQ9JI58 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1dQ9JI58 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Raet1dQ9JI58 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1dQ9JI58 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1dQ9JI58 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1dQ9JI58 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1dQ9JI58 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1dQ9JI58 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Raet1dQ9JI58 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1dQ9JI58 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1dQ9JI58 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1dQ9JI58 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Raet1dQ9JI58 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Gm21956-201ENSMUST00000179946 522 ntBASIC18.37■□□□□ 0.53
Raet1dQ9JI58 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Raet1dQ9JI58 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms