Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rhox4bQ9JI43 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16■□□□□ 0.15
Rhox4bQ9JI43 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rhox4bQ9JI43 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Rhox4bQ9JI43 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Rhox4bQ9JI43 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rhox4bQ9JI43 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rhox4bQ9JI43 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Rhox4bQ9JI43 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.95■□□□□ 0.14
Rhox4bQ9JI43 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rhox4bQ9JI43 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rhox4bQ9JI43 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rhox4bQ9JI43 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rhox4bQ9JI43 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rhox4bQ9JI43 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms