Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmgn3Q9DCB1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmgn3Q9DCB1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmgn3Q9DCB1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.64■□□□□ 0.58
Hmgn3Q9DCB1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmgn3Q9DCB1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmgn3Q9DCB1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmgn3Q9DCB1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmgn3Q9DCB1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmgn3Q9DCB1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmgn3Q9DCB1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmgn3Q9DCB1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgn3Q9DCB1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgn3Q9DCB1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hmgn3Q9DCB1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms