Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Calr3Q9D9Q6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Calr3Q9D9Q6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.47■□□□□ 0.87
Calr3Q9D9Q6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Calr3Q9D9Q6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
Calr3Q9D9Q6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Calr3Q9D9Q6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Calr3Q9D9Q6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Calr3Q9D9Q6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Calr3Q9D9Q6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Calr3Q9D9Q6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Calr3Q9D9Q6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Calr3Q9D9Q6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Calr3Q9D9Q6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.42■□□□□ 0.86
Calr3Q9D9Q6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Calr3Q9D9Q6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Calr3Q9D9Q6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Calr3Q9D9Q6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Calr3Q9D9Q6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Calr3Q9D9Q6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Calr3Q9D9Q6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.39■□□□□ 0.86
Calr3Q9D9Q6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Calr3Q9D9Q6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Calr3Q9D9Q6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Calr3Q9D9Q6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.39■□□□□ 0.86
Calr3Q9D9Q6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Calr3Q9D9Q6 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.39■□□□□ 0.85
Calr3Q9D9Q6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms