Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtl8cQ9D6I0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtl8cQ9D6I0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtl8cQ9D6I0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtl8cQ9D6I0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rtl8cQ9D6I0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Rtl8cQ9D6I0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Gm14117-201ENSMUST00000122417 843 ntBASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.78■□□□□ 0.44
Rtl8cQ9D6I0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rtl8cQ9D6I0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rtl8cQ9D6I0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtl8cQ9D6I0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtl8cQ9D6I0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Gm12922-201ENSMUST00000120626 809 ntBASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtl8cQ9D6I0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtl8cQ9D6I0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.73■□□□□ 0.43
Rtl8cQ9D6I0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtl8cQ9D6I0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms