Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3404Q9D506 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.12■□□□□ 0.97
Gm3404Q9D506 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.12■□□□□ 0.97
Gm3404Q9D506 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3404Q9D506 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3404Q9D506 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3404Q9D506 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Gm3404Q9D506 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.11■□□□□ 0.97
Gm3404Q9D506 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.11■□□□□ 0.97
Gm3404Q9D506 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3404Q9D506 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.11■□□□□ 0.97
Gm3404Q9D506 Gm43137-201ENSMUST00000198052 594 ntBASIC21.11■□□□□ 0.97
Gm3404Q9D506 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gm3404Q9D506 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3404Q9D506 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.11■□□□□ 0.97
Gm3404Q9D506 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Gm12821-201ENSMUST00000120022 600 ntBASIC21.1■□□□□ 0.97
Gm3404Q9D506 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3404Q9D506 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Gm27454-201ENSMUST00000185090 204 ntBASIC21.09■□□□□ 0.97
Gm3404Q9D506 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm3404Q9D506 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3404Q9D506 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3404Q9D506 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3404Q9D506 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.08■□□□□ 0.97
Gm3404Q9D506 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3404Q9D506 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Gm3404Q9D506 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.07■□□□□ 0.96
Gm3404Q9D506 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3404Q9D506 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm3404Q9D506 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3404Q9D506 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3404Q9D506 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3404Q9D506 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3404Q9D506 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Gm3404Q9D506 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.06■□□□□ 0.96
Gm3404Q9D506 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3404Q9D506 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3404Q9D506 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3404Q9D506 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3404Q9D506 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3404Q9D506 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3404Q9D506 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3404Q9D506 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms