Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vps33aQ9D2N9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps33aQ9D2N9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps33aQ9D2N9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Vps33aQ9D2N9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vps33aQ9D2N9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Vps33aQ9D2N9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps33aQ9D2N9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps33aQ9D2N9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps33aQ9D2N9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps33aQ9D2N9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vps33aQ9D2N9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33aQ9D2N9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.09■□□□□ 0.97
Vps33aQ9D2N9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33aQ9D2N9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33aQ9D2N9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vps33aQ9D2N9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps33aQ9D2N9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Vps33aQ9D2N9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Vps33aQ9D2N9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps33aQ9D2N9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vps33aQ9D2N9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps33aQ9D2N9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vps33aQ9D2N9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms