Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Gm5786-201ENSMUST00000085368 882 ntBASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1bQ9D0N7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1bQ9D0N7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chaf1bQ9D0N7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chaf1bQ9D0N7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.64■□□□□ 0.58
Chaf1bQ9D0N7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1bQ9D0N7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1bQ9D0N7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.64■□□□□ 0.57
Chaf1bQ9D0N7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1bQ9D0N7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1bQ9D0N7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chaf1bQ9D0N7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chaf1bQ9D0N7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Chaf1bQ9D0N7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chaf1bQ9D0N7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Chaf1bQ9D0N7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms