Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pfdn1Q9CWM4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pfdn1Q9CWM4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pfdn1Q9CWM4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pfdn1Q9CWM4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.52■□□□□ 0.39
Pfdn1Q9CWM4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pfdn1Q9CWM4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pfdn1Q9CWM4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pfdn1Q9CWM4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pfdn1Q9CWM4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Pfdn1Q9CWM4 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pfdn1Q9CWM4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pfdn1Q9CWM4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms